STRINGSTRING
ssr2708 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ssr2708" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr2708Hypothetical protein (53 aa)    
Predicted Functional Partners:
slr1612
Hypothetical protein (286 aa)
   
          0.772
slr0976
Hypothetical protein (242 aa)
   
          0.755
slr1739
PsbW homolog (122 aa)
   
          0.714
sll0888
Hypothetical protein (190 aa)
   
          0.673
sll1618
Hypothetical protein (200 aa)
   
          0.665
sll1222
Hypothetical protein (212 aa)
   
          0.597
slr1980
Hypothetical protein (297 aa)
   
          0.554
slr2027
Hypothetical protein (464 aa)
   
          0.550
sll1830
Hypothetical protein (358 aa)
   
          0.540
sll1946
Hypothetical protein (825 aa)
   
          0.536
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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