STRINGSTRING
slr1608 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1608" - Glucose dehydrogenase-B in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1608Glucose dehydrogenase-B (412 aa)    
Predicted Functional Partners:
gloB
Glyoxalase II; Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid (257 aa)
       
    0.653
slr0630
Hypothetical protein (219 aa)
       
    0.636
slr1259
Hypothetical protein (232 aa)
       
    0.636
gdh
Glucose dehydrogenase (248 aa)
           
  0.558
ssr2711
Hypothetical protein (84 aa)
              0.557
slr0019
Hypothetical protein (892 aa)
   
        0.460
glsA
Hypothetical protein (327 aa)
           
  0.429
sll1485
Hypothetical protein (162 aa)
   
        0.425
sll1486
Hypothetical protein (265 aa)
   
        0.425
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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