STRINGSTRING
slr1609 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1609" - Long-chain-fatty-acid CoA ligase in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1609Long-chain-fatty-acid CoA ligase (636 aa)    
Predicted Functional Partners:
des6
Delta-6 desaturase (359 aa)
         
    0.963
sll1969
Hypothetical protein (202 aa)
     
 
  0.808
thl
Acetyl coenzyme A acetyltransferase (409 aa)
 
   
  0.748
todF
2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (296 aa)
   
  0.738
slr0314
Bromoperoxidase (276 aa)
   
  0.724
sll0249
Hypothetical protein (251 aa)
   
  0.724
slr1235
Hypothetical protein (293 aa)
   
  0.724
slr1916
Esterase (283 aa)
   
  0.724
slr2053
Hypothetical protein (283 aa)
   
  0.724
SYNGTS_1958
Chaperon-like protein for quinone binding in photosystem II (326 aa)
       
  0.723
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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