STRINGSTRING
slr1050 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1050" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1050Hypothetical protein (477 aa)    
Predicted Functional Partners:
ssl3342
Hypothetical protein (84 aa)
   
          0.712
ssr0332
Hypothetical protein (70 aa)
   
          0.693
slr0038
Hypothetical protein (132 aa)
   
          0.688
ssr1155
Hypothetical protein (67 aa)
   
          0.688
sll1155
Hypothetical protein (113 aa)
   
          0.660
sll1219
Hypothetical protein (108 aa)
   
          0.636
slr1442
Hypothetical protein (285 aa)
   
          0.630
slr1052
Hypothetical protein (170 aa)
 
          0.620
secE
Secretory protein SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation (81 aa)
   
          0.618
slr0740
Hypothetical protein (131 aa)
   
          0.617
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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