STRINGSTRING
slr1053 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1053" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1053Hypothetical protein (267 aa)    
Predicted Functional Partners:
slr1841
Hypothetical protein (630 aa)
   
     
  0.821
sll1630
Hypothetical protein (141 aa)
           
  0.820
ndhO
Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration (By similarity) (72 aa)
   
     
  0.803
slr1908
Hypothetical protein (591 aa)
   
     
  0.784
slr0459
Hypothetical protein (474 aa)
   
          0.778
slr1914
Hypothetical protein (118 aa)
   
          0.778
sll1834
Hypothetical protein (134 aa)
   
          0.777
sll0350
Hypothetical protein (803 aa)
   
          0.774
slr0670
Hypothetical protein (291 aa)
   
          0.774
sll1940
Hypothetical protein (157 aa)
   
          0.773
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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