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frpC protein (Synechocystis sp. PCC6803) - STRING interaction network
"frpC" - Iron-regulated protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frpCIron-regulated protein (591 aa)    
Predicted Functional Partners:
hlyD
Hemolysin secretion protein (583 aa)
 
   
  0.898
SYNGTS_1690
Toxin secretion ABC transporter ATP-binding protein (1011 aa)
 
     
  0.879
sll0237
Hypothetical protein (343 aa)
           
  0.846
SYNGTS_3062
Haemolysin secretion ATP-binding protein (733 aa)
 
     
  0.748
slr1403
Integrin alpha- and beta4- subunit domain homolog (3016 aa)
   
          0.680
SYNGTS_1336
Inosine 5-monophosphate dehydrogenase (387 aa)
       
    0.591
sll1466
Hypothetical protein (413 aa)
 
          0.564
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY (482 aa)
           
  0.548
futA2
Periplasmic iron-binding protein; Probably part of a periplasmic ABC transporter complex futA1A2BC (TC 3.A.1.10.2) involved in Fe(3+) ion import (ferric iron). This protein and futA1 (slr1295) are subunit proteins that have redundant or overlapping substrate-binding functions (Probable). The differing subcellular locations of futA1 (predominantly thylakoid lumen) and futA2 (predominantly periplasmic) suggest they may fulfill different roles (346 aa)
           
  0.530
sll1951
Hemolysin (1741 aa)
   
     
0.502
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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