STRINGSTRING
gad protein (Synechocystis sp. PCC6803) - STRING interaction network
"gad" - Glutamate decarboxylase in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gadGlutamate decarboxylase (467 aa)    
Predicted Functional Partners:
gdhA
Glutamate dehydrogenase (NADP+); Catalyzes the reversible oxidative deamination of glutamate to alpha-ketoglutarate and ammonia (428 aa)
     
 
  0.965
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase (990 aa)
     
  0.944
slr0091
Aldehyde dehydrogenase (456 aa)
     
  0.940
glsA
Hypothetical protein (327 aa)
   
 
  0.929
lpdA
Dihydrolipoamide dehydrogenase; Lipoamide dehydrogenase is a component of the alpha- ketoacid dehydrogenase complexes (478 aa)
     
 
  0.924
ggt
Gamma-glutamyltranspeptidase (518 aa)
     
 
    0.911
glnA
Glutamate--ammonia ligase (473 aa)
   
 
  0.907
panC/cmk
Bifunctional pantothenate synthetase/cytidylate kinase (513 aa)
   
 
  0.906
gltD
NADH-glutamate synthase small subunit (494 aa)
         
  0.901
glnN
Glutamate--ammonia ligase (724 aa)
         
    0.900
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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