STRINGSTRING
sll1940 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll1940" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1940Hypothetical protein (157 aa)    
Predicted Functional Partners:
sll1939
Hypothetical protein (214 aa)
              0.859
slr1841
Hypothetical protein (630 aa)
   
     
  0.839
slr1753
Hypothetical protein (1749 aa)
           
  0.831
sll0173
Hypothetical protein (352 aa)
           
  0.830
slr1272
Hypothetical protein (254 aa)
           
  0.830
slr1077
Hypothetical protein (386 aa)
           
  0.830
gumB
GumB protein (504 aa)
   
     
  0.808
slr1275
Hypothetical protein (284 aa)
   
     
  0.804
slr1276
Hypothetical protein (275 aa)
   
     
  0.787
slr0459
Hypothetical protein (474 aa)
   
          0.778
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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