STRINGSTRING
slr2046 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr2046" - Fat protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2046Fat protein (1965 aa)    
Predicted Functional Partners:
ssr3467
Hypothetical protein (95 aa)
              0.619
sll0499
Hypothetical protein (948 aa)
   
          0.567
slr2047
Phosphate starvation-inducible protein (328 aa)
              0.552
sll0615
Transmembrane protein FT27 (206 aa)
   
          0.497
slr0408
Hypothetical protein (4199 aa)
   
          0.466
slr1028
Integrin alpha subunit protein homolog (3972 aa)
   
          0.449
sll1775
Hypothetical protein (817 aa)
   
          0.435
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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