Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
glcF | sll1830 | gene:10498006 | gene:10498007 | Glycolate oxidase subunit (Fe-S) protein; ORF_ID:sll1831. | ORF_ID:sll1830; unknown protein. | 0.580 |
glcF | slr1919 | gene:10498006 | gene:10498008 | Glycolate oxidase subunit (Fe-S) protein; ORF_ID:sll1831. | ABC1-like; ORF_ID:slr1919; Belongs to the protein kinase superfamily. ADCK protein kinase family. | 0.407 |
sll1830 | glcF | gene:10498007 | gene:10498006 | ORF_ID:sll1830; unknown protein. | Glycolate oxidase subunit (Fe-S) protein; ORF_ID:sll1831. | 0.580 |
sll1830 | slr1919 | gene:10498007 | gene:10498008 | ORF_ID:sll1830; unknown protein. | ABC1-like; ORF_ID:slr1919; Belongs to the protein kinase superfamily. ADCK protein kinase family. | 0.525 |
slr1919 | glcF | gene:10498008 | gene:10498006 | ABC1-like; ORF_ID:slr1919; Belongs to the protein kinase superfamily. ADCK protein kinase family. | Glycolate oxidase subunit (Fe-S) protein; ORF_ID:sll1831. | 0.407 |
slr1919 | sll1830 | gene:10498008 | gene:10498007 | ABC1-like; ORF_ID:slr1919; Belongs to the protein kinase superfamily. ADCK protein kinase family. | ORF_ID:sll1830; unknown protein. | 0.525 |
slr1919 | slr1920 | gene:10498008 | gene:10498009 | ABC1-like; ORF_ID:slr1919; Belongs to the protein kinase superfamily. ADCK protein kinase family. | ORF_ID:slr1920; unknown protein. | 0.497 |
slr1920 | slr1919 | gene:10498009 | gene:10498008 | ORF_ID:slr1920; unknown protein. | ABC1-like; ORF_ID:slr1919; Belongs to the protein kinase superfamily. ADCK protein kinase family. | 0.497 |