STRINGSTRING
lepB2 protein (Synechocystis sp. PCC6803) - STRING interaction network
"lepB2" - Leader peptidase I in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lepB2Leader peptidase I (218 aa)    
Predicted Functional Partners:
slr1378
Hypothetical protein (237 aa)
         
  0.945
lepB1
Leader peptidase I (196 aa)
   
   
0.828
slr1376
Hypothetical protein (110 aa)
              0.700
hhoA
Protease; A putative protease, its function overlaps that of the related putative proteases HhoB and HtrA (394 aa)
 
   
  0.696
hhoB
Protease; A putative protease, its function overlaps that of the related putative proteases HtrA and HhoA (416 aa)
 
   
  0.674
secA
Preprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (932 aa)
   
   
  0.663
htrA
Serine protease; A putative protease, its function overlaps that of the related putative proteases HhoA and HhoB (419 aa)
 
   
  0.655
lepA
LepA gene product; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (603 aa)
   
   
  0.637
sll1499
Ferredoxin-dependent glutamate synthase (1556 aa)
   
   
  0.630
gltB
Ferredoxin-dependent glutamate synthase (1550 aa)
   
   
  0.630
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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