STRINGSTRING
slr1378 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1378" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1378Hypothetical protein (237 aa)    
Predicted Functional Partners:
lepB2
Leader peptidase I (218 aa)
         
  0.945
sll1784
Hypothetical protein (267 aa)
           
  0.752
sll1956
Hypothetical protein (192 aa)
   
          0.744
sll0007
Hypothetical protein (191 aa)
   
          0.737
pmgA
Photomixotrophic growth related protein (171 aa)
   
     
  0.727
slr0740
Hypothetical protein (131 aa)
   
          0.721
slr0664
Hypothetical protein (120 aa)
   
          0.715
sll1232
Hypothetical protein (187 aa)
   
          0.714
sll1250
Hypothetical protein (128 aa)
   
          0.713
ssr2130
Hypothetical protein (62 aa)
   
          0.705
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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