STRINGSTRING
pobA protein (Synechocystis sp. PCC6803) - STRING interaction network
"pobA" - Phenoxybenzoate dioxygenase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pobAPhenoxybenzoate dioxygenase (338 aa)    
Predicted Functional Partners:
ssl2559
Ferredoxin (98 aa)
              0.860
slr1205
Rieske (2Fe-2S) domain protein (117 aa)
   
  0.817
sll0263
Hypothetical protein (239 aa)
 
          0.754
sll0225
Hypothetical protein (512 aa)
   
          0.744
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase (990 aa)
       
  0.676
sll1499
Ferredoxin-dependent glutamate synthase (1556 aa)
     
 
    0.659
gltB
Ferredoxin-dependent glutamate synthase (1550 aa)
     
 
    0.659
slr0091
Aldehyde dehydrogenase (456 aa)
       
  0.656
gabD
Succinate-semialdehyde dehydrogenase (NADP+); Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate (454 aa)
       
  0.656
sll1296
CheA-like protein Hik39/TasAY2 (924 aa)
              0.564
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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