STRINGSTRING
spoIID protein (Synechocystis sp. PCC6803) - STRING interaction network
"spoIID" - Sporulation protein SpoIID homolog in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIDSporulation protein SpoIID homolog (391 aa)    
Predicted Functional Partners:
sll1284
Serine esterase (204 aa)
              0.829
cofG
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1; Catalyzes the radical-mediated transfer of the hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino- 6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO) (313 aa)
              0.829
slr0788
pre-B cell enhancing factor (462 aa)
       
    0.631
slr1699
Hypothetical protein (282 aa)
              0.610
slr0688
Hypothetical protein (343 aa)
   
          0.576
ftsI
Penicillin-binding protein (607 aa)
 
     
  0.547
murA
UDP-N-acetylglucosamine1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (438 aa)
         
  0.467
sll0496
Hypothetical protein (394 aa)
   
          0.467
slr0882
Hypothetical protein (394 aa)
   
          0.462
sll0192
Hypothetical protein (423 aa)
   
          0.438
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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