STRINGSTRING
sll1927 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll1927" - ABC transporter in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1927ABC transporter (650 aa)    
Predicted Functional Partners:
sll0833
OppC in a binding protein-dependent transport system (371 aa)
 
  0.992
sll0312
OppB in a binding protein-dependent transportsystem (337 aa)
 
  0.991
slr1740
Extracellular solute-binding protein (582 aa)
 
 
  0.964
slr0324
Probable oligopeptide ABC transporter permease protein (294 aa)
 
  0.961
sll1768
Probable oligopeptide ABC transporter permease protein (326 aa)
 
  0.957
sll1699
Extracellular solute-binding protein (631 aa)
 
 
  0.927
slr1406
Hypothetical protein (181 aa)
           
  0.751
sll1620
Hypothetical protein (158 aa)
           
  0.664
SYNGTS_0741
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex (157 aa)
           
  0.650
sll1926
Hypothetical protein (145 aa)
              0.628
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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