STRINGSTRING
slr2005 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr2005" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2005Hypothetical protein (261 aa)    
Predicted Functional Partners:
slr1298
Hypothetical protein (755 aa)
     
      0.777
ssl1972
Hypothetical protein (93 aa)
   
          0.701
slr1946
Hypothetical protein (261 aa)
   
          0.690
sll1926
Hypothetical protein (145 aa)
              0.640
slr1515
Hypothetical protein (474 aa)
   
          0.597
ssr0109
Hypothetical protein (62 aa)
 
          0.542
ycf45
Hypothetical protein (589 aa)
   
        0.542
sll0822
Hypothetical protein (129 aa)
   
          0.523
slr2025
Hypothetical protein (153 aa)
   
          0.523
slr0404
Hypothetical protein (333 aa)
   
        0.495
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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