STRINGSTRING
slr2008 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr2008" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2008Hypothetical protein (116 aa)    
Predicted Functional Partners:
slr2012
Monovalent cation/H+ antiporter subunit B (215 aa)
 
 
  0.992
ndhD6
Monovalent cation/H+ antiporter subunit D (495 aa)
 
   
  0.983
ndhD5
Monovalent cation/H+ antiporter subunit D (487 aa)
 
   
  0.977
slr2011
Hypothetical protein (199 aa)
 
     
  0.960
ssr3409
Hypothetical protein (97 aa)
 
     
  0.958
slr2010
Hypothetical protein (130 aa)
 
     
  0.958
ssr3410
Hypothetical protein (98 aa)
 
     
  0.956
slr1137
Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (551 aa)
         
  0.652
cydB
Cytochrome oxidase d subunit II (336 aa)
       
    0.647
cydA
Cytochrome oxidase d subunit I (483 aa)
       
    0.647
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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