STRINGSTRING
slr2012 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr2012" - Monovalent cation/H+ antiporter subunit B in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2012Monovalent cation/H+ antiporter subunit B (215 aa)    
Predicted Functional Partners:
ndhD6
Monovalent cation/H+ antiporter subunit D (495 aa)
 
 
  0.994
slr2008
Hypothetical protein (116 aa)
 
 
  0.992
slr2006
Monovalent cation/H+ antiporter subunit C (114 aa)
 
 
  0.989
ssr3410
Hypothetical protein (98 aa)
 
     
  0.988
slr2011
Hypothetical protein (199 aa)
 
     
  0.986
slr2010
Hypothetical protein (130 aa)
 
     
  0.985
ssr3409
Hypothetical protein (97 aa)
 
     
  0.982
ndhD5
Monovalent cation/H+ antiporter subunit D (487 aa)
 
 
  0.977
slr1513
Hypothetical protein (110 aa)
   
     
  0.814
slr2013
Hypothetical protein (435 aa)
         
  0.795
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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