STRINGSTRING
slr2013 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr2013" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2013Hypothetical protein (435 aa)    
Predicted Functional Partners:
slr0286
Hypothetical protein (426 aa)
           
  0.932
slr1478
Hypothetical protein (317 aa)
 
        0.864
slr0254
Hypothetical protein (266 aa)
 
          0.862
morR
MorR protein (314 aa)
 
   
  0.810
slr2012
Monovalent cation/H+ antiporter subunit B (215 aa)
         
  0.795
sll1273
Hypothetical protein (474 aa)
   
     
  0.781
sll1717
Hypothetical protein (511 aa)
           
  0.753
slr2010
Hypothetical protein (130 aa)
         
  0.740
slr2011
Hypothetical protein (199 aa)
         
  0.735
ssr3409
Hypothetical protein (97 aa)
         
  0.735
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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