STRINGSTRING
slr2031 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr2031" - Sigma factor SigG regulation protein RsbU in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2031Sigma factor SigG regulation protein RsbU (452 aa)    
Predicted Functional Partners:
slr1861
Hypothetical protein (143 aa)
 
 
 
  0.903
slr1856
Anti-sigma B factor antagonist (109 aa)
 
 
  0.882
slr2030
Hypothetical protein (451 aa)
         
  0.882
slr1912
Anti-sigma F factor antagonist (118 aa)
 
 
  0.813
pmgA
Photomixotrophic growth related protein (171 aa)
 
 
 
  0.760
sll1573
Hypothetical protein (104 aa)
           
  0.754
spkA
Serine/threonine protein kinase; Protein kinase that regulates cellular motility via phosphorylation of membrane proteins (416 aa)
     
 
  0.753
sll1771
Hypothetical protein (254 aa)
           
  0.713
sll0043
CheA like protein Hik18 (1402 aa)
   
   
  0.712
slr1859
Hypothetical protein (108 aa)
   
 
  0.701
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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