STRINGSTRING
slr1134 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1134" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1134Hypothetical protein (148 aa)    
Predicted Functional Partners:
slr1690
Hypothetical protein (261 aa)
   
     
  0.977
sll1054
Hypothetical protein (187 aa)
         
  0.948
nadE
NH(3)-dependent NAD(+) synthetase; Can use both glutamine or ammonia as a nitrogen source (558 aa)
   
 
  0.912
slr0787
Hypothetical protein; The Nudix hydrolase domain is active on ADP-ribose, (2’)-phospho-ADP-ribose, IDP-ribose and NADPH (339 aa)
 
     
  0.904
argH
L-argininosuccinate lyase (461 aa)
            0.890
slr0788
pre-B cell enhancing factor (462 aa)
   
 
  0.781
nadC
Nicotinate-nucleotide pyrophosphorylase; Involved in the catabolism of quinolinic acid (QA) (295 aa)
   
 
    0.774
SYNGTS_2754
Nitrilase (341 aa)
   
 
    0.772
sll0601
Hypothetical protein (272 aa)
   
 
    0.772
sll1640
Hypothetical protein (321 aa)
   
 
    0.772
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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