STRINGSTRING
slr1139 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1139" - Thioredoxin in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1139Thioredoxin (109 aa)    
Predicted Functional Partners:
slr1198
Rehydrin (211 aa)
   
  0.997
sll0755
Thiol-specific antioxidant protein; Reduces peroxides. May play an important role in eliminating peroxides generated during metabolism (By similarity) (200 aa)
   
  0.991
sll1621
Membrane protein (189 aa)
     
  0.987
ssl2245
Hypothetical protein (88 aa)
       
 
  0.968
merA
Mercuric reductase (518 aa)
   
  0.944
lpdA
Dihydrolipoamide dehydrogenase; Lipoamide dehydrogenase is a component of the alpha- ketoacid dehydrogenase complexes (478 aa)
   
  0.944
sll0703
Hypothetical protein (399 aa)
   
  0.944
slr0600
Hypothetical protein (326 aa)
   
 
  0.920
SYNGTS_0128
Bacterioferritin comigratory protein (160 aa)
   
 
  0.915
apcB
Allophycocyanin b chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers (161 aa)
       
      0.877
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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