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SYNGTS_0728 protein (Synechocystis sp. PCC6803) - STRING interaction network
"SYNGTS_0728" - Glutamate permease in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGTS_0728Glutamate permease (402 aa)    
Predicted Functional Partners:
sll0146
High-affinity branched-chain amino acid transport protein BraE (372 aa)
           
  0.940
sll1103
Hypothetical protein (445 aa)
           
  0.938
natA
Conserved component of ABC transporter for natural amino acids (267 aa)
           
  0.920
slr1735
ABC transporter (252 aa)
           
  0.904
natB
Periplasmic binding protein of ABC transporter for natural amino acids (454 aa)
           
  0.900
sll1102
Hypothetical protein (179 aa)
           
  0.848
glnP
ABC-type transporter protein (530 aa)
   
   
  0.814
natD
Neutral amino acid transport system permease protein NatD (286 aa)
           
  0.802
SYNGTS_1742
Glutamine-binding protein (286 aa)
   
   
  0.758
slr1201
Hypothetical protein (410 aa)
           
  0.752
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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