STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1147Sensory transduction histidine kinase; ORF_ID:slr1147. (434 aa)    
Predicted Functional Partners:
sll1905
Hybrid sensory kinase; ORF_ID:sll1905.
 
 
0.977
slr1783
NarL subfamily; ORF_ID:slr1783.
 
 
 
 0.963
slr1759
Hybrid sensory kinase; ORF_ID:slr1759.
 
 
0.917
slr0947
OmpR subfamily; ORF_ID:slr0947.
  
 
 0.888
slr2098
Hybrid sensory kinase; ORF_ID:slr2098.
 
 
 0.858
slr1042
CheY subfamily; ORF_ID:slr1042.
  
   0.838
sll0039
CheY subfamily; ORF_ID:sll0039.
  
   0.835
slr0115
OmpR subfamily; ORF_ID:slr0115.
  
   0.831
slr1037
CheY subfamily; ORF_ID:slr1037.
  
   0.830
slr0081
OmpR subfamily; ORF_ID:slr0081.
  
   0.827
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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