STRINGSTRING
slr1149 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1149" - ABC transporter in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1149ABC transporter (601 aa)    
Predicted Functional Partners:
sll1672
Hybrid sensory kinase Hik12 (834 aa)
     
   
  0.866
sll0167
Hypothetical protein (164 aa)
           
  0.844
sll1673
Regulatory component of sensory transduction system Rre2 (452 aa)
           
  0.844
slr1259
Hypothetical protein (232 aa)
   
   
  0.836
slr1261
Hypothetical protein (179 aa)
         
  0.833
sll0163
Beta transducin-like protein (1693 aa)
     
   
  0.829
slr1260
Hypothetical protein (177 aa)
           
  0.829
slr1037
CheY subfamily protein Rre10 (131 aa)
     
   
  0.828
sll0064
Hypothetical protein (275 aa)
           
  0.768
sll0274
Hypothetical protein (196 aa)
           
  0.758
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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