STRINGSTRING
lacF protein (Synechocystis sp. PCC6803) - STRING interaction network
"lacF" - Lactose transport system permease protein LacF in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacFLactose transport system permease protein LacF (298 aa)    
Predicted Functional Partners:
lacG
Lactose transport system permease protein LacG (270 aa)
 
  0.999
malK
Cytoplasmic membrane protein for maltose uptake (408 aa)
  0.993
ggtA
ATP-binding subunit of an ABC-type osmolyte transporter (363 aa)
  0.993
srrA
Periplasmic sugar-binding protein of ABC transporter (433 aa)
 
 
  0.990
slr0531
Membrane bound sugar transport protein (298 aa)
 
  0.962
slr0529
Hypothetical protein (421 aa)
   
 
  0.800
slr1865
Hypothetical protein (420 aa)
   
 
  0.800
sll1878
ABC transporter (368 aa)
     
  0.792
nnr
Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (By similarity) (524 aa)
     
   
  0.771
nplT
Neopullulanase (508 aa)
 
     
  0.748
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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