STRINGSTRING
ETR1 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ETR1" - Ethylene response sensor protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETR1Ethylene response sensor protein (844 aa)    
Predicted Functional Partners:
slr1213
AraC subfamily protein Rre14 (241 aa)
     
  0.941
slr1215
Hypothetical protein (222 aa)
   
     
  0.787
slr1693
PatA subfamily protein PixE/Rre24; Controls heterocyst pattern formation (380 aa)
           
  0.739
SYNGTS_0819
Cobalt-chelatase subunit CobN (1092 aa)
         
  0.634
kaiC
Circadian clock protein KaiC; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction (519 aa)
         
  0.630
slr1210
Hypothetical protein (129 aa)
              0.588
slr1209
Hypothetical protein (109 aa)
              0.588
sll1003
Sensory transduction histidine kinase Hik13 (661 aa)
 
     
  0.587
slr1208
Short-chain alcohol dehydrogenase family (657 aa)
              0.573
slr1837
OmpR subfamily protein ManR/Rre16 (234 aa)
           
  0.555
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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