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slr1214 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1214" - PatA subfamily protein Rre15 in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1214PatA subfamily protein Rre15; Controls heterocyst pattern formation (372 aa)    
Predicted Functional Partners:
pilJ
Methyl-accepting chemotaxis protein(MCP) homolog (953 aa)
   
   
    0.895
mcpA
Methyl-accepting chemotaxis protein (869 aa)
   
   
    0.879
slr0322
CheA-like protein PilL/TaxAY3/Hik43 (1095 aa)
   
   
    0.862
slr1215
Hypothetical protein (222 aa)
         
  0.860
sll1293
Hypothetical protein (155 aa)
   
   
    0.848
slr1041
PatA subfamily protein PilG/TaxP3/Rre6; Controls heterocyst pattern formation (388 aa)
   
   
0.847
slr1213
AraC subfamily protein Rre14 (241 aa)
           
  0.842
sll1291
PatA subfamily protein Rre12/TaxP2; Controls heterocyst pattern formation (401 aa)
   
   
0.829
slr1043
Hypothetical protein (187 aa)
   
   
    0.823
slr1166
Hypothetical protein (354 aa)
           
  0.712
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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