STRINGSTRING
slr1215 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1215" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1215Hypothetical protein (222 aa)    
Predicted Functional Partners:
slr1693
PatA subfamily protein PixE/Rre24; Controls heterocyst pattern formation (380 aa)
           
  0.890
slr1214
PatA subfamily protein Rre15; Controls heterocyst pattern formation (372 aa)
         
  0.860
ETR1
Ethylene response sensor protein (844 aa)
   
     
  0.787
slr1428
Hypothetical protein (636 aa)
   
          0.765
slr1413
Hypothetical protein (481 aa)
   
          0.761
slr1213
AraC subfamily protein Rre14 (241 aa)
           
  0.759
sll0169
Hypothetical protein (714 aa)
   
        0.747
sll1751
Hypothetical protein (111 aa)
   
        0.745
sll0038
PatA subfamily protein PixG/PisG/TaxP1/Rer1/Rre36; Controls heterocyst pattern formation (402 aa)
           
  0.735
sll0478
Hypothetical protein (147 aa)
   
          0.729
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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