STRINGSTRING
pmgA protein (Synechocystis sp. PCC6803) - STRING interaction network
"pmgA" - Photomixotrophic growth related protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmgAPhotomixotrophic growth related protein (171 aa)    
Predicted Functional Partners:
slr1912
Anti-sigma F factor antagonist (118 aa)
 
 
 
  0.915
slr1024
Hypothetical protein (213 aa)
   
     
  0.905
slr1859
Hypothetical protein (108 aa)
     
 
  0.900
slr1856
Anti-sigma B factor antagonist (109 aa)
     
 
  0.900
sll1961
Hypothetical protein (388 aa)
           
  0.890
sll1568
Fibrillin (202 aa)
           
  0.890
sll1969
Hypothetical protein (202 aa)
              0.859
rpoF
RNA polymerase sigma-37 (258 aa)
   
 
  0.854
icfG
ICFG protein; Involved in cross-regulation of inorganic carbon and glucose metabolisms (634 aa)
 
 
 
  0.791
dspA
Sensory histidine kinase NblS/DspA/Dfr/Hik33 (663 aa)
   
     
  0.791
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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