Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| sll0821 | sll1473 | gene:10500040 | gene:10500504 | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | 0.785 |
| sll0821 | sll1905 | gene:10500040 | gene:10498754 | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. | Hybrid sensory kinase; ORF_ID:sll1905. | 0.991 |
| sll0821 | slr0302 | gene:10500040 | gene:10500173 | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. | ORF_ID:slr0302; PleD gene product homologue. | 0.793 |
| sll0821 | slr0829 | gene:10500040 | gene:10500015 | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. | ORF_ID:slr0829; PleD gene product homologue. | 0.786 |
| sll0821 | slr1102 | gene:10500040 | gene:10497617 | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. | ORF_ID:slr1102; hypothetical protein. | 0.941 |
| sll0821 | slr1142 | gene:10500040 | gene:10498162 | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. | ORF_ID:slr1142; unknown protein. | 0.502 |
| sll0821 | slr1143 | gene:10500040 | gene:10498163 | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. | ORF_ID:slr1143; hypothetical protein. | 0.880 |
| sll0821 | slr1213 | gene:10500040 | gene:10498258 | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. | AraC subfamily; ORF_ID:slr1213. | 0.583 |
| sll0821 | slr1759 | gene:10500040 | gene:10497917 | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. | Hybrid sensory kinase; ORF_ID:slr1759. | 0.989 |
| sll0821 | slr2077 | gene:10500040 | gene:10498275 | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. | ORF_ID:slr2077; hypothetical protein. | 0.707 |
| sll1473 | sll0821 | gene:10500504 | gene:10500040 | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. | 0.785 |
| sll1473 | sll1905 | gene:10500504 | gene:10498754 | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | Hybrid sensory kinase; ORF_ID:sll1905. | 0.993 |
| sll1473 | slr0302 | gene:10500504 | gene:10500173 | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | ORF_ID:slr0302; PleD gene product homologue. | 0.791 |
| sll1473 | slr0829 | gene:10500504 | gene:10500015 | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | ORF_ID:slr0829; PleD gene product homologue. | 0.781 |
| sll1473 | slr1102 | gene:10500504 | gene:10497617 | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | ORF_ID:slr1102; hypothetical protein. | 0.739 |
| sll1473 | slr1142 | gene:10500504 | gene:10498162 | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | ORF_ID:slr1142; unknown protein. | 0.898 |
| sll1473 | slr1143 | gene:10500504 | gene:10498163 | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | ORF_ID:slr1143; hypothetical protein. | 0.810 |
| sll1473 | slr1213 | gene:10500504 | gene:10498258 | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | AraC subfamily; ORF_ID:slr1213. | 0.760 |
| sll1473 | slr1759 | gene:10500504 | gene:10497917 | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | Hybrid sensory kinase; ORF_ID:slr1759. | 0.993 |
| sll1473 | slr2077 | gene:10500504 | gene:10498275 | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | ORF_ID:slr2077; hypothetical protein. | 0.705 |
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