STRINGSTRING
icsA protein (Synechocystis sp. PCC6803) - STRING interaction network
"icsA" - LPS glycosyltransferase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icsALPS glycosyltransferase (379 aa)    
Predicted Functional Partners:
sll1722
Hypothetical protein (433 aa)
 
          0.956
sll1725
ABC transporter (610 aa)
 
          0.922
sll1723
Hypothetical protein (413 aa)
       
0.920
sll1726
Hypothetical protein (329 aa)
              0.737
rfbU
Mannosyltransferase B (367 aa)
 
     
  0.617
SYNGTS_2427
Mannosyl transferase (365 aa)
 
     
  0.497
slr1299
UDP-glucose dehydrogenase (453 aa)
 
          0.492
slr1077
Hypothetical protein (386 aa)
   
          0.474
sll0254
Hypothetical protein (650 aa)
   
          0.468
slr1739
PsbW homolog (122 aa)
   
          0.466
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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