STRINGSTRING
ccmK4 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ccmK4" - Carbon dioxide concentrating mechanism protein CcmK in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmK4Carbon dioxide concentrating mechanism protein CcmK; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (112 aa)    
Predicted Functional Partners:
ccmM
Carbon dioxide concentrating mechanism protein CcmM (669 aa)
     
 
  0.988
ccmL
Carbon dioxide concentrating mechanism protein CcmL (100 aa)
 
     
  0.979
slr1347
Carbonic anhydrase; Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation (311 aa)
           
  0.854
SYNGTS_2307
Carbonic anhydrase; Reversible hydration of carbon dioxide (263 aa)
           
  0.842
ccmN
Hypothetical protein (241 aa)
         
  0.830
cbbL
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site (470 aa)
         
  0.797
cbbS
Ribulose bisphosphate carboxylase small subunit; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity) (113 aa)
         
  0.796
ndhF3
NADH dehydrogenase subunit 5 (615 aa)
         
  0.693
slr1840
Hypothetical protein (371 aa)
         
  0.687
ndhD3
NADH dehydrogenase subunit 4 (502 aa)
           
  0.667
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (3%) [HD]