STRINGSTRING
slr1544 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1544" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1544Hypothetical protein (103 aa)    
Predicted Functional Partners:
ssr2595
High light inducible protein (70 aa)
         
  0.858
slr0967
Hypothetical protein (150 aa)
           
  0.690
sll0939
Hypothetical protein (125 aa)
           
  0.629
sll0528
Hypothetical protein (379 aa)
           
  0.540
sll1592
NarL subfamily protein Rre19 (226 aa)
           
  0.533
sll1862
Hypothetical protein (143 aa)
           
  0.521
sodB
Superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems (199 aa)
           
  0.521
SYNGTS_0897
RNA polymerase sigma-E factor (223 aa)
              0.463
sll1590
Sensory transduction histidine kinase Hik20 (350 aa)
           
  0.422
slr0423
Rare lipoprotein A (321 aa)
           
  0.420
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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