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SYNGTS_0897 protein (Synechocystis sp. PCC6803) - STRING interaction network
"SYNGTS_0897" - RNA polymerase sigma-E factor in Synechocystis sp. PCC6803
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGTS_0897RNA polymerase sigma-E factor (223 aa)    
Predicted Functional Partners:
slr1546
Hypothetical protein (212 aa)
 
 
 
  0.946
sll0267
Hypothetical protein (1578 aa)
     
 
  0.698
sll0687
Hypothetical protein (185 aa)
   
     
  0.696
sigA
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (425 aa)
     
 
  0.625
hhoA
Protease; A putative protease, its function overlaps that of the related putative proteases HhoB and HtrA (394 aa)
   
   
  0.601
hhoB
Protease; A putative protease, its function overlaps that of the related putative proteases HtrA and HhoA (416 aa)
   
   
  0.578
htrA
Serine protease; A putative protease, its function overlaps that of the related putative proteases HhoA and HhoB (419 aa)
   
   
  0.575
slr1547
Hypothetical protein (332 aa)
              0.570
rpoC2
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1317 aa)
       
 
  0.546
rpoC1
RNA polymerase gamma-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (626 aa)
       
 
  0.508
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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