STRINGSTRING
rfbJ protein (Synechocystis sp. PCC6803) - STRING interaction network
"rfbJ" - RfbJ protein in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbJRfbJ protein (318 aa)    
Predicted Functional Partners:
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
 
  0.819
sps
Sucrose phosphate synthase (720 aa)
   
 
  0.814
SYNGTS_1536
dTDP-glucose 4-6-dehydratase (309 aa)
   
 
  0.812
rfbG
CDP-glucose-4,6-dehydratase (360 aa)
   
 
  0.812
sll0576
Putative sugar-nucleotide epimerase/dehydratase (312 aa)
   
 
  0.809
slr0583
Hypothetical protein (310 aa)
   
 
  0.809
sll0456
Hypothetical protein (333 aa)
   
 
  0.809
fcl
Hypothetical protein; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (312 aa)
   
 
  0.809
slr2111
Hypothetical protein (157 aa)
   
   
  0.717
fmt
methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (By similarity) (330 aa)
   
 
  0.684
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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