STRINGSTRING
slr1220 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1220" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1220Hypothetical protein (317 aa)    
Predicted Functional Partners:
slr0503
Hypothetical protein (337 aa)
   
        0.777
sll0413
Hypothetical protein (207 aa)
   
          0.777
slr1949
Hypothetical protein (212 aa)
   
          0.777
sll0272
Hypothetical protein (157 aa)
   
          0.776
slr0731
Hypothetical protein (402 aa)
   
          0.776
slr1195
Hypothetical protein (154 aa)
   
        0.775
sll0822
Hypothetical protein (129 aa)
   
          0.775
slr0923
Hypothetical protein; Probably a ribosomal protein or a ribosome-associated protein (112 aa)
   
        0.773
sll0359
Hypothetical protein (155 aa)
   
          0.772
rpoZ
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity) (76 aa)
   
          0.772
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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