STRINGSTRING
ssr2060 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ssr2060" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr2060Hypothetical protein (79 aa)    
Predicted Functional Partners:
sll1150
Hypothetical protein (252 aa)
   
          0.754
sll1757
Hypothetical protein (292 aa)
   
          0.749
sll0319
Hypothetical protein (297 aa)
   
          0.745
sll0846
Hypothetical protein (102 aa)
   
          0.745
slr0554
Hypothetical protein (1036 aa)
   
          0.733
sll0148
Hypothetical protein (735 aa)
   
          0.700
sll0382
Hypothetical protein (176 aa)
   
          0.682
sll1064
Hypothetical protein (568 aa)
   
          0.677
slr1661
Hypothetical protein (654 aa)
   
          0.671
slr1799
Hypothetical protein (637 aa)
   
          0.651
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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