STRINGSTRING
slr1438 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1438" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1438Hypothetical protein (289 aa)    
Predicted Functional Partners:
slr1437
Hypothetical protein (112 aa)
              0.859
nplT
Neopullulanase (508 aa)
   
   
  0.719
xylR
Xylose repressor (327 aa)
       
  0.655
glk
Glucokinase (355 aa)
       
    0.654
sll1138
Hypothetical protein (248 aa)
   
 
    0.644
slr1420
Hypothetical protein (425 aa)
 
   
  0.563
slr1436
Hypothetical protein (283 aa)
              0.556
SYNGTS_1375
UDP-glucose 4-epimerase (338 aa)
   
   
  0.492
SYNGTS_0343
UDP-glucose-4-epimerase (340 aa)
   
   
  0.492
SYNGTS_0356
UDP-glucose-4-epimerase (105 aa)
   
   
  0.486
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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