STRINGSTRING
slr1442 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1442" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1442Hypothetical protein (285 aa)    
Predicted Functional Partners:
slr1173
Hypothetical protein (463 aa)
          0.965
sll1164
Hypothetical protein (349 aa)
   
          0.739
spkE
Protein kinase PknA; Lacks protein kinase activity (614 aa)
              0.706
sll1858
Hypothetical protein (627 aa)
   
          0.705
rpmF
50S ribosomal protein L32 (57 aa)
   
          0.692
slr0316
Hypothetical protein (263 aa)
   
          0.688
sll1477
Hypothetical protein (832 aa)
   
          0.684
slr0935
Hypothetical protein (152 aa)
   
          0.654
slr2084
Hypothetical protein (221 aa)
   
          0.648
slr1315
Hypothetical protein (202 aa)
   
          0.640
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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