STRINGSTRING
spkE protein (Synechocystis sp. PCC6803) - STRING interaction network
"spkE" - Protein kinase PknA in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spkEProtein kinase PknA; Lacks protein kinase activity (614 aa)    
Predicted Functional Partners:
spkA
Serine/threonine protein kinase; Protein kinase that regulates cellular motility via phosphorylation of membrane proteins (416 aa)
   
     
  0.928
sll1574
Hypothetical protein (103 aa)
           
  0.849
sll1033
Hypothetical protein (668 aa)
   
     
  0.848
slr0152
Serine/threonine protein kinase (631 aa)
   
     
  0.839
sll0513
Hypothetical protein (277 aa)
         
  0.757
sll1387
Hypothetical protein (254 aa)
           
  0.752
slr1442
Hypothetical protein (285 aa)
              0.706
sll1771
Hypothetical protein (254 aa)
   
     
  0.699
sll1473
Chromatic acclimation sensor CcaS/ScaS/Hik32 (753 aa)
           
  0.626
glyS
glycyl-tRNA synthetase beta chain (722 aa)
           
  0.621
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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