STRINGSTRING
napC protein (Synechocystis sp. PCC6803) - STRING interaction network
"napC" - Carboxynorspermidine decarboxylase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
napCCarboxynorspermidine decarboxylase (387 aa)    
Predicted Functional Partners:
slr0049
Hypothetical protein (398 aa)
 
 
  0.957
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (279 aa)
   
 
  0.827
asd
Aspartate beta-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (338 aa)
   
 
  0.819
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine (305 aa)
   
  0.806
slr0887
Hypothetical protein (269 aa)
   
  0.806
speB2
Agmatine ureohydrolase (390 aa)
   
 
  0.801
speB1
Arginase (306 aa)
   
 
  0.800
lysC
Aspartate kinase (600 aa)
   
 
  0.700
merA
Mercuric reductase (518 aa)
     
 
  0.681
lpdA
Dihydrolipoamide dehydrogenase; Lipoamide dehydrogenase is a component of the alpha- ketoacid dehydrogenase complexes (478 aa)
     
 
  0.676
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (34%) [HD]