STRINGSTRING
sll1315 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll1315" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1315Hypothetical protein (352 aa)    
Predicted Functional Partners:
sll0514
Hypothetical protein (554 aa)
     
 
  0.842
slr0245
Acetylpolyamine aminohydolase; Putative deacetylase (304 aa)
     
    0.729
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (213 aa)
     
    0.718
ank
Erythroid ankyrin (441 aa)
     
  0.713
slr1959
Hypothetical protein (827 aa)
     
    0.706
sll1366
Helicase of the snf2/rad54 family (1039 aa)
     
    0.702
ski2
Antiviral protein (1006 aa)
     
    0.702
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (173 aa)
     
    0.697
sll0864
Hypothetical protein (157 aa)
     
    0.675
dctP
C4-dicarboxylase binding protein (369 aa)
              0.669
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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