STRINGSTRING
slr1410 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1410" - Beta transducin-like protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1410Beta transducin-like protein (334 aa)    
Predicted Functional Partners:
sll0514
Hypothetical protein (554 aa)
   
 
  0.872
slr1409
Beta transducin-like protein (326 aa)
 
     
0.859
slr0439
Hypothetical protein (501 aa)
   
          0.776
sll1366
Helicase of the snf2/rad54 family (1039 aa)
   
    0.748
slr1840
Hypothetical protein (371 aa)
       
 
  0.749
slr0143
Hypothetical protein (1191 aa)
 
0.733
slr0245
Acetylpolyamine aminohydolase; Putative deacetylase (304 aa)
     
    0.729
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (213 aa)
     
    0.718
ank
Erythroid ankyrin (441 aa)
     
  0.713
slr1959
Hypothetical protein (827 aa)
     
    0.706
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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