STRINGSTRING
slr1854 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1854" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1854Hypothetical protein (198 aa)    
Predicted Functional Partners:
slr1855
Hypothetical protein (607 aa)
     
  0.986
slr1856
Anti-sigma B factor antagonist (109 aa)
 
   
  0.880
slr1853
Hypothetical protein (113 aa)
 
     
  0.846
sll0755
Thiol-specific antioxidant protein; Reduces peroxides. May play an important role in eliminating peroxides generated during metabolism (By similarity) (200 aa)
   
 
  0.845
slr1198
Rehydrin (211 aa)
   
 
  0.845
sll1621
Membrane protein (189 aa)
     
      0.814
SYNGTS_1078
Glycogen operon protein GlgX (707 aa)
 
          0.775
SYNGTS_1336
Inosine 5-monophosphate dehydrogenase (387 aa)
     
    0.732
thiE
Thiamin biosynthetic bifunctional enzyme; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) (343 aa)
       
    0.699
slr1852
Hypothetical protein (188 aa)
         
  0.691
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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