STRINGSTRING
slr1856 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1856" - Anti-sigma B factor antagonist in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1856Anti-sigma B factor antagonist (109 aa)    
Predicted Functional Partners:
slr1861
Hypothetical protein (143 aa)
 
 
 
  0.996
icfG
ICFG protein; Involved in cross-regulation of inorganic carbon and glucose metabolisms (634 aa)
 
 
  0.969
slr1855
Hypothetical protein (607 aa)
 
     
  0.926
slr1983
Regulatory component of sensory transduction system Rre22 (603 aa)
 
 
  0.905
pmgA
Photomixotrophic growth related protein (171 aa)
     
 
  0.900
SYNGTS_1078
Glycogen operon protein GlgX (707 aa)
 
     
  0.884
slr2031
Sigma factor SigG regulation protein RsbU (452 aa)
 
 
  0.882
slr1854
Hypothetical protein (198 aa)
 
   
  0.880
slr1859
Hypothetical protein (108 aa)
         
  0.867
slr1912
Anti-sigma F factor antagonist (118 aa)
   
     
  0.858
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (5%) [HD]