STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ICFGICFG protein; Involved in cross-regulation of inorganic carbon and glucose metabolisms. (634 aa)    
Predicted Functional Partners:
slr1861
ORF_ID:slr1861; unknown protein.
 
 
 0.997
slr1859
Anti-sigma factor antagonist; ORF_ID:slr1859; unknown protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.981
slr1856
Anti-sigma B factor antagonist; ORF_ID:slr1856; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.977
sll1905
Hybrid sensory kinase; ORF_ID:sll1905.
 
  
 0.852
slr1912
Anti-sigma F factor antagonist; ORF_ID:slr1912; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.845
slr1759
Hybrid sensory kinase; ORF_ID:slr1759.
 
  
 0.824
slr1855
ORF_ID:slr1855; unknown protein.
 
   
 0.822
sll1392
ORF_ID:sll1392; hypothetical protein.
      
 0.788
sll0039
CheY subfamily; ORF_ID:sll0039.
   
  
 0.782
slr2104
Hybrid sensory kinase; ORF_ID:slr2104.
 
  
 0.763
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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