STRINGSTRING
slr1876 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1876" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1876Hypothetical protein (157 aa)    
Predicted Functional Partners:
hoxH
Hydrogenase large subunit (474 aa)
 
     
  0.968
slr1907
Hypothetical protein (179 aa)
           
  0.940
hoxY
Hydrogenase small subunit (182 aa)
 
     
  0.939
hypD
Hydrogenase isoenzymes formation protein HypD (374 aa)
   
   
  0.890
hypA2
Hypothetical protein; Probably plays a role in a hydrogenase nickel cofactor insertion step (120 aa)
   
   
  0.870
sll1432
Hydrogenase isoenzymes formation protein HypB; Could be involved in nickel binding and accumulation (285 aa)
         
  0.844
hoxU
Bidirectional hydrogenase complex protein HoxU (238 aa)
 
     
  0.802
hypE
Hydrogenase expression/formation protein HypE (345 aa)
         
  0.795
nifJ
Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1199 aa)
   
   
  0.788
hypC
Hydrogenase expression/formation protein HypC (76 aa)
   
   
  0.762
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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