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hpcE protein (Synechocystis sp. PCC6803) - STRING interaction network
"hpcE" - 2-hydroxyhepta-2,4-diene-1,7dioate isomerase in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
hpcE2-hydroxyhepta-2,4-diene-1,7dioate isomerase (276 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III beta subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (By similarity) (391 aa)
     
      0.810
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase (990 aa)
 
  0.785
gabD
Succinate-semialdehyde dehydrogenase (NADP+); Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate (454 aa)
 
  0.760
slr0091
Aldehyde dehydrogenase (456 aa)
   
  0.758
gst1
Glutathione S-transferase (271 aa)
   
 
  0.703
gst
Glutathione S-transferase (184 aa)
   
 
  0.703
sll1902
Hypothetical protein (399 aa)
   
 
  0.703
slr0236
Hypothetical protein (222 aa)
   
 
  0.703
cpcE
Phycocyanin alpha phycocyanobilin lyase CpcE; Required for the chromophorylation of the CpcA gene product (272 aa)
              0.684
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (533 aa)
   
 
  0.673
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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