STRINGSTRING
slr1880 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1880" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1880Hypothetical protein (377 aa)    
Predicted Functional Partners:
slr1975
Renin-binding protein (391 aa)
   
          0.720
blaOXA-3
Beta-lactamase (304 aa)
   
          0.477
slr1535
Hypothetical protein (489 aa)
   
          0.450
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate (306 aa)
              0.431
slr2042
Hypothetical protein (275 aa)
 
          0.424
sll1761
Hypothetical protein (204 aa)
              0.418
sll0241
Hypothetical protein (340 aa)
   
          0.413
SYNGTS_1375
UDP-glucose 4-epimerase (338 aa)
              0.406
SYNGTS_0356
UDP-glucose-4-epimerase (105 aa)
              0.406
SYNGTS_0343
UDP-glucose-4-epimerase (340 aa)
              0.406
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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